2018

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Zimmermann, M., Escrig, S., Lavik, G. , Kuypers, MMM , Meibom, A., Ackermann, M. and Schreiber, F. (2018). Substrate and electron donor limitation induce phenotypic heterogeneity in different metabolic activities in a green sulfur bacterium. Environmental Microbiology Reports 10 (2): 179-183.

Zhu, G. , Wang, S., Li, Y., Zhuang, L., Zhao, S., Wang, C., Kuypers, MMM , Jetten, MSM and Zhu, Y. (2018). Microbial pathways for nitrogen loss in an upland soil. Environmental Microbiology 20 (5): 1723-1738.

Schutte, CA, Teske, A., MacGregor, BJ, Salman-Carvalho, V., Lavik, G. , Hach, PF and de Beer, D. (2018). Filamentous Giant Beggiatoaceae from the Guaymas Basin Are Capable of both Denitrification and Dissimilatory Nitrate Reduction to Ammonium. Applied and Environmental Microbiology 84 (15): e02860-02817. DOI: 1128 / AEM.02860-17

Schorn, S., and Cypionka, H. (2018) Crispy Diet: Grazers of Achromatium oxaliferum in Lake Stechlin Sediments. Microbial Ecology 76: 584-587

Schoffelen, NJ , Mohr, W. , Ferdelman, TG , Littmann, S. , Duerschlag, J. , Zubkov, MV, Ploug, H. and Kuypers, MMM (2018). Single-cell imaging of phosphorus uptake shows that key harmful algae rely on different phosphorus sources for growth. Scientific Reports 8 (1): 17182. DOI: 1038 / s41598-018-35310-w

Schlosser, C., Streu, P., Frank, M., Lavik, G. , Croot, PL, Dengler, M. and Achterberg, EP (2018). H ₂ S events in the Peruvian oxygen minimum zone facilitate enhanced dissolved Fe concentrations. Scientific Reports 8 (1): 12642. DOI: 1038 / s41598-018-30580-w

Naqvi, S. W. A., Lam, P., Narvenkar, G., Sarkar, A., Naik, H., Pratihary, A., Shenoy, D. M., Gauns, M., Kurian, S., Damare, S., Duret, M., Lavik, G. and Kuypers, M. M. M. (2018). Methane stimulates massive nitrogen loss from freshwater reservoirs in India. Nature Communications 9(1): 1265. DOI: 1038/s41467-018-03607-z

Moradi, N., Liu, B., Iversen, M., Kuypers, M. M., Ploug, H. and Khalili, A. (2018). A new mathematical model to explore microbial processes and their constraints in phytoplankton colonies and sinking marine aggregates. Science Advances 4(10): eaat1991. DOI: 0.1126/sciadv.aat1991

Martínez-Pérez, C., Mohr, W., Schwedt, A., Dürschlag, J., Callbeck, C. M., Schunck, H., Dekaezemacker, J., Buckner, C. R. T., Lavik, G., Fuchs, B. M. and Kuypers, M. M. M. (2018). Metabolic versatility of a novel N₂-fixing Alphaproteobacterium isolated from a marine oxygen minimum zone. Environmental Microbiology 20(2): 755-768

Marchant, H. K., Tegetmeyer, H. E., Ahmerkamp, S., Holtappels, M., Lavik, G., Graf, J., Schreiber, F., Mussmann, M., Strous, M. and Kuypers, M. M. M. (2018). Metabolic specialization of denitrifiers in permeable sediments controls N₂O emissions. Environmental Microbiology 20(12): 4486-4502

Kuypers, M. M. M., Marchant, H. K. and Kartal, B. (2018). The microbial nitrogen-cycling network. Nature Reviews Microbiology 16(5): 263-276.

Kitzinger, K., Koch, H., Lücker, S., Sedlacek, C. J., Herbold, C., Schwarz, J., Daebeler, A., Mueller, A. J., Lukumbuzya, M., Romano, S., Leisch, N., Karst, S. M., Kirkegaard, R., Albertsen, M., Nielsen, P. H., Wagner, M. and Daims, H. (2018). Characterization of the First “Candidatus Nitrotoga” Isolate Reveals Metabolic Versatility and Separate Evolution of Widespread Nitrite-Oxidizing Bacteria. mBio 9(4): e01186-01118. DOI: 1128/mBio.01186-18

Khalili, A., Matyka, M., Mohammadi, R.M., Weise, J. and Kuypers, M. M. M. (2018). Porosity variation within a porous bed composed of multisized grains. Powder Technology 338: 830-835.

Hilligsøe, K. M., Jensen, J. B., Ferdelman, T. G., Fossing, H., Lapham, L., Røy, H. and Jørgensen, B. B. (2018). Methane fluxes in marine sediments quantified through core analyses and seismo-acoustic mapping (Bornholm Basin, Baltic Sea). Geochimica et Cosmochimica Acta 239: 255-274.

Graf, J. S., Mayr, M. J., Marchant, H. K., Tienken, D., Hach, P. F., Brand, A., Schubert, C. J., Kuypers, M. M. M. and Milucka, J. (2018). Bloom of a denitrifying methanotroph, ‘Candidatus Methylomirabilis limnetica’, in a deep stratified lake. Environmental Microbiology 20(7): 2598-2614.

Ganesh, S., Bertagnolli, A. D., Bristow, L. A., Padilla, C. C., Blackwood, N., Aldunate, M., Bourbonnais, A., Altabet, M. A., Malmstrom, R. R., Woyke, T., Ulloa, O., Konstantinidis, K. T., Thamdrup, B. and Stewart, F. J. (2018). Single cell genomic and transcriptomic evidence for the use of alternative nitrogen substrates by anammox bacteria. The ISME Journal 12(11): 2706-2722.

Fleming, E. J., Woyke, T., Donatello, R. A., Kuypers, M. M. M., Sczyrba, A., Littmann, S. and Emerson, D. (2018). Insights into the Fundamental Physiology of the Uncultured Fe-Oxidizing Bacterium Leptothrix ochracea. Applied and Environmental Microbiology 84(9): e02239-02217. DOI: 1128/AEM.02239-17

Callbeck, C. M., Lavik, G., Ferdelman, T. G., Fuchs, B., Gruber-Vodicka, H. R., Hach, P. F., Littmann, S., Schoffelen, N. J., Kalvelage, T., Thomsen, S., Schunck, H., Löscher, C. R., Schmitz, R. A. and Kuypers, M. M. M. (2018). Oxygen minimum zone cryptic sulfur cycling sustained by offshore transport of key sulfur oxidizing bacteria. Nature Communications 9(1): 1729. DOI:1038/s41467-018-04041-x

Braeckman, U., Janssen, F., Lavik, G., Elvert, M., Marchant, HK , Buckner, C. , Bienhold, C. and Wenzhöfer, F. (2018). Carbon and nitrogen turnover in the Arctic deep sea: in situ benthic community response to diatom and coccolithophorid phytodetritus. Biogeosciences 15 (21): 6537-6557.

Bergkvist, J., Klawonn, I., Whitehouse, MJ, Lavik, G. , Brüchert, V. and Ploug, H. (2018). Turbulence simultaneously stimulates small- and large-scale CO ₂ sequestration by chain-forming diatoms in the sea. Nature Communications 9 (1): 3046.