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Franz, J., Krahmann, G.,  Lavik, G., Grasse, P., Dittmar, T., and Riebesell, U. (2012). Dynamics and stoichiometry of nutrients and phytoplankton in waters influenced by the oxygen minimum zone in the eastern tropical Pacific. Deep-Sea Research Part I-Oceanographic Research Papers 62, 20-31.

Milucka, J., T. G. Ferdelman,Polerecky, D. Franzke, G. Wegener, M.Schmid, I.Lieberwirth, M. Wagner, F.Widdel and M. M. M. Kuypers (2012) Zero-valent sulphur is a key intermediate in marine methane oxidation. Nature 491, 541-546.
Milucka J., F. Widdel, S. Shima (2012) Immunological detection of enzymes for sulfate reduction in anaerobic methane-oxidizing consortia, Environmental Microbiology 15(5), 1561–1571.
 Alonso, C.,N. Musat, B. Adam, M. Kuypers, R.Amann (2012) HISH–SIMS analysis of bacterial uptake of algal-derived carbon in the Río de la Plata estuary. Systematic and Applied Microbiology 35, 541-548
 Owens, J. D., T. W. Lyons, X. Li, K. G. Macleod, G. Gordon, M. M. M. Kuypers, A. Anbar, W.Kuhnt, S.Severmann (2012) Iron isotope and trace metal records of iron cycling in the proto-North Atlantic during the Cenomanian-Turonian oceanic anoxic event (OAE-2). Paleoceanography 27, doi:10.1029/2012PA002328
 Sheik, A. R., C. P. D. Brussaard, G. Lavik, R. A. Foster, N. Musat, B. Adam and M. M. M. Kuypers (2012) Viral infection of Phaeocystisglobosa impedes release of chitinous star-like structures: quantification using single cell approaches. Environmental Microbiology, 15, 1441-1451
 van de Vossenberg, J., D.Woebken, W. J. Maalcke, H. J. C. T. Wessels, B. E. Dutilh, B.Kartal, E. M. Janssen-Megens, G.Roeselers, J. Yan, D.Speth, J.Gloerich, W. Geerts, E. van der Biezen, W.Pluk, K.-J.Francoijs, L. Russ, P. Lam, S. A. Malfatti, S. G.Tringe, S. C. M. Haaijer, H. J. M. Op den Camp, H. G. Stunnenberg, R.Amann, M. M. M. Kuypers and M. S. M. Jetten (2012) The metagenome of the marine anammox bacterium ‘Candidatus Scalindua profunda’ illustrates the versatility of this globally important nitrogen cycle bacterium, Environmental Microbiology, 15, 1275-1289
Sokoll, S., M. Holtappels, P. Lam, G. Collins, M.Schlüter, G. Lavik and M. M. M. Kuypers (2012) Benthic nitrogen loss in the Arabian Sea off Pakistan. Frontiers in Microbiology, 3, 395
Sokoll, S., M. Holtappels, P. Lam, G. Collins, M.Schlüter, G. Lavik and M. M. M. Kuypers (2012) Benthic nitrogen loss in the Arabian Sea off Pakistan. Frontiers in Microbiology, ), Front. Microbiol.  3, 395
Bourbonnais, A., S. K. Juniper, D. A. Butterfield, A. H. Devol, M. M. Kuypers, G. Lavik, S. J. Hallam, C. B. Wenk, B. X. Chang, S. A. Murdock, and M. F. Lehmann (2012) Activity and abundance of denitrifying bacteria in the subsurface biosphere of diffuse hydrothermal vents of the Juan de Fuca Ridge. Biogeosciences, 9, 4661-4678.
Thompson, A. W., A. Foster, A.Krupke, B. J. Carter, N.Musat, D.Vaulot, M. M. M Kuypers, and J. P. Zehr (2012) Novel unicellular cyanobacterium is symbiotic with a single-celled eukaryotic alga. In: Science 337, 1546-1550.
Großkopf, T., W. Mohr, T. Baustian, H. Schunck, D. Gill, M. M. Kuypers, G. Lavik, R. A. Schmitz, D. W. R. Wallace, J. LaRoche (2012) Doubling of marine dinitrogen-fixation rates based on direct measurements, Nature; 488, 361-364.
Musat, N., R. Foster, T. Vagner, B. Adam and M.M.M. Kuypers (2012) Detecting metabolic activities in single cells, with emphasis on nanoSIMS, FEMS Microbiology Reviews, 36, 486-511.
White, A., R.A. Foster, C.R. Benitez-Nelson, P. Masqué, E. Verdeny, B.N.Popp, K.E. Arthur, and F.G. Prahl (2012) Nitrogen fixation in the Gulf of California and the Eastern Tropical North Pacific, Progress in Oceanography 109, 1-17.
Yeung, L.Y., W.M. Berelson, E.D. Young, M.G. Prokopenko, N. Rollins, V.J. Coles, J.P. Montoya, E.J. Carpenter, D.K. Steinberg, A. Foster, and P.L. Yager (2012) Impact of diatom-diazotroph associations on carbon export in the Amazon River plume, Geophysical Research Letters, 39, L118069.
Luo, Y.-W., S.C. Doney, L.A. Anderson, M. Benavides, I. Berman-Frank, A. Bode, S. Bonnet, K.H. Boström, D. Böttjer, D.G. Capone, E.J. Carpenter, Y.L. Chen, M.J. Church, J.E. Dore, L.I. Falcón, A. Fernández, A. Foster, K. Furuya, F. Gómez, K. Gundersen, A.M. Hynes, D.M. Karl, S. Kitajima, R.J. Langlois, J. LaRoche, R.M. Letelier, E. Marañón, D.J. McGillicuddyJr, P.H. Moisander, C.M., Moore, B. Mouriño-Carballido, M.R. Mulholland, J.A. Needoba, K.M. Orcutt, A.J. Poulton, E. Rahav, P. Raimbault, A.P. Rees, L. Riemann, T. Shiozaki, A. Subramaniam, T. Tyrrell, K.A. Turk-Kubo, M. Varela, T.A. Villareal, W.A. Webb, A.E. White, J. Wu, J., J.P. Zehr (2012) Database of diazotrophs in global ocean: abundance, biomass and nitrogen fixation rates, Earth Syst. Sci. Data Discuss., 5, 47-106.
Thang, N.M., V. Brüchert, Formolo, G. Wegener, L. Ginters, B.B. Jørgensen, T.G. Ferdelman(2012) The impact of sediment and carbon fluxes on the biogeochemistry of methane and sulfur in littoral Baltic Sea Sediments (Himmerfjaerden, Sweden). Estuaries and Coasts, 36, 98-115.
Beutler, M., Milucka, S. Hinck, F. Schreiber, J. Brock, M. Mussmann, H. N. Schulz-Vogt and D. de Beer (2012) Vacuolar respiration of nitrate coupled to energy conservation in filamentous Beggiatoaceae. Environmental Microbiology 14, 2911–2919.
Arnold, G. L., W. Lyons, G. G. Gordon, and A. D. Anbar (2012) Extreme change in sulfide concentrations in the Black Sea during the Little Ice Age reconstructed using molybdenum isotopes. Geology, 40, 595-598.
Berndmeyer, C., D. Birgel, Brunner,L. M. Wehrmann, N. Jöns, W. Bach, E. T. Arning, K. B. Föllmi, and J. Peckmann(2012) The influence of bacterial activity on phosphorite formation in the Miocene Monterey Formation, California, Palaeogeography, Palaeoclimatology, Palaeoecology, 317–318, 171–181.
Brunner, B., Einsiedl, G. L. Arnold, I. Müller, S. Templer, and S. M. Bernasconi(2012)The reversibility of dissimilatory sulphate reduction and the cell-internal multi-step reduction of sulphite to sulphide: insights from the oxygen isotope composition of sulphate, Isotopes in Environmental and Health Studies, 48, 33-54.
Füssel, J., P. Lam, G. Lavik, M.M Jensen, Holtappels, M. Günter, and M.M.M. Kuypers(2012) Nitrite oxidation in the Namibian oxygen minimum zone, The ISME Journal,6, 1200-1209.
Gao, H., M. Matyka, B. Liu, A. Khalili, J.E. Kostka, G. Collins, S. Jansen, Holtappels, M.M. Jensen, T.H. Badewien, M. Beck, M. Grunwald, D. de Beer, G. Lavik, and M.M.M. Kuypers(2012) Intensive and extensive nitrogen loss from intertidal permeable sediments of the Wadden Sea,Limnology and Oceanography, 57, 185–198.
Halm, H., P. Lam, G. Lavik, T. Dittmar, T.G. Ferdelman, J. LaRoche, S. D’Hondt, M.M.M Kuypers(2012) Heterotrophic organisms dominate nitrogen fixation in the South Pacific Gyre,The ISME Journal,6, 1238-1249
Heindel, K., D. Birgel, Brunner, V. Thiel, H. Westphal, E. Gischler, S. B. Ziegenbalg, G. Cabioch, P. Sjovall, and J. Peckmann(2012) Post-glacial microbialite formation in coral reefs in the Pacific, Atlantic, and Indian Ocean, Chemical Geology, 304–305, 117–130.
Lettmann, K. A., Riedinger, R. Ramlau, N. Knab, M. Böttcher, A. Khalili, J.O. Wolff, and B.B. Jørgensen(2012) Estimation of biogeochemical rates from concentration profiles: a novel inverse method, Estuarine, Coastal and Shelf Science, 100, 26-37.
Picard, A., Testemale, J-L.Hazemann, I. Daniel(2012)The influence of high hydrostatic pressure on bacterial dissimilatory iron reduction, Geochimica et Cosmochimica Acta, 88, 120-129.
Pirlet, H., L.M. Wehrmann, A. Foubert, Brunner, D. Blamart, L. de Mol, D. Van Rooij, J. Dewanckele, V. Cnudde, R. Swennen, P. Duyck, J-P. Henriet(2012)Uniqueauthigenic mineral assemblages reveal different diagenetic histories in two neighbouring cold-water coral mounds on Pen Duick Escarpment, Gulf of Cadiz. Sedimentology, 59, 578–604.
Risgaard-Petersen, N., A. Revil, Meister, L.P. Nielsen(2012) Sulfur, iron-, and calcium cycling associated with natural electric currents running through marine sediment, Geochimica et Cosmochimica Acta, 92, 1-13.
Thompson, A., A. Foster, A. Krupke, B.J. Carter, N. Musat, D. Vaulot, M.M.M Kuypers, and J.P. Zehr (2012) Unicellular cyanobacterium symbiotic with a single-celled eukaryotic alga, Science, 337, 1546-1550.
Polerecky, L., Adam, J. Milucka, N. Musat, T. Vagner and M.M.M. Kuypers (2012) [Bitte aktivieren Sie Javascript] – a tool for the analysis of nanoSIMS data in environmental microbiology. Environmental Microbiology, 14, 1009-1023.
Vossmeyer, A., C. Deusner, C. Kato, F. Inagaki, G. Ferdelman(2012) Substrate-specific pressure-dependence of microbial sulfate reduction in deep-sea cold seep sediments of the Japan Trench. Frontiers in Microbiology, 3, 1-12.
Wegener G., M. Bausch., T. Holler, M. Thang, X.P Mollar., M.Y Kellermann., K-U. Hinrichs, and A. Boetius (2012) Assessing sub-seafloor microbial activity by combined stable isotope probing with deuterated water and 13C-bicarbonate, Environmental Microbiology 14(6), 1517-1527.
 Ziebis, W., J. McManus, T. Ferdelman, F. Schmidt-Schierhorn, W. Bach, J. Muratli, K. J. Edwards, and H. Villinger (2012) Interstitial fluid chemistry of sediments underlying the North Atlantic gyre and the influence of subsurface fluid flow,Earth and Planetary Science Letters, 323–324, 79–91
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