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Pub­lic­a­tions 2019

Amann, R.I., S. Baichoo, B.J. Blen­cowe, P. Bork, M. Boro­dovsky, C. Brooks­bank, P.S.G. Chain, R.R. Col­well, D.G. Daf­fon­chio, A. Danchin, V. de Lorenzo, P.C. Dor­res­tein, R.D. Finn, C.M. Fraser, J.A. Gil­bert, S.J. Hal­lam, P. Hugen­holtz, J.P.A. Ioan­nidis, J.K. Jans­son, J.F. Kim, H.-P. Klenk, M.G. Klotz, R. Knight, K.T. Kon­stantin­idis, N.C. Kyrpides, C.E. Ma­son, A.C. McHardy, F. Meyer, C.A. Ouzounis, A.A.N. Pat­ri­nos, M. Podar, K.S. Pol­lard, J. Ravel, A. Reyes Muñoz, R.J. Roberts, R. Ros­selló-Móra, S.-A. San­sone, P.D. Schloss, L.M. Schriml, J.C. Setubal, R. Sorek, R.L. Stevens, J.M. Tiedje, A. Tur­janski, G.W. Tyson, D.W. Ussery, G.M. Wein­stock, O. White, W.B. Whit­man, I. Xen­arios. (2019). To­wards un­re­stric­ted use of pu­blic ge­no­mic data. Sci­ence 363:350-2. (doi:10.1126/science.aaw1280).
Amann, R.. (2019). Das Früh­jahrsmik­ro­biom der süd­lichen Nord­see: Bac­terioplank­ton-Sukzes­sionen und bak­ter­i­elle Poly­sac­char­id­ver­wer­tung in einem Küst­en­meer. In: Die unbekannte Welt der Mikrobiome - Rundgespräche Forum Ökologie, pp. 31-41. Bayr­ische Akademie der Wis­senschaften (Eds.) Ver­lag Dr. Pfeil, München, Ger­many.
Fischer, T., M. Schorb, G. Reintjes, A. Ko­lo­vou, R. Santarella-Mell­wig, S. Mark­ert, E. Rhiel, S. Littmann, D. Becher, T. Schweder, and J. Harder. (2019). Bi­opearl­ing of in­ter­con­nec­ted outer mem­brane ves­icle chains by a mar­ine fla­vobac­terium. Appl. En­viron. Mi­cro­biol. 85:e00829-19. (doi:10.1128/AEM.00829-19).
Francis, T.B., K. Krüger, B.M. Fuchs, H. Teeling, and R.I. Amann. (2019). Candidatus Pro­si­li­i­coc­cus ver­nus, a spring phy­to­plank­ton bloom as­so­cia­ted mem­ber of the Flavobacteriaceae. Syst. Appl. Mi­cro­bi­ol. 42:41-53. (doi:10.1016/j.syapm.2018.08.007).
Hehem­ann, J.H., G. Reintjes, L. Klassen, A.D. Smith, D. Ndeh, C. Arnosti, R. Amann, D.W. Ab­bott. (2019). Sin­gle cell fluo­re­scence ima­ging of gly­can up­take by in­tes­ti­nal bac­te­ria. ISME J. 13:1883-89. (doi:10.1038/s41396-019-0406-z)
Kappelmann, L., K. Krüger, J.H. Hehem­ann, J. Harder, S. Mark­ert, F. Un­fried, D. Becher, N. Sha­piro, T. Schweder, R.I. Amann, and H. Teeling. (2019). Po­ly­sac­cha­ri­de uti­liza­t­i­on loci of North Sea Flavobacteriia as ba­sis for us­ing SusC/​​D-pro­te­in ex­pres­si­on for pre­dic­ting ma­jor phy­to­plank­ton gly­cans. ISME J. 13:76-91. (doi:10.1038/s41396-018-0242-6). 
Knittel, K., G. We­gener, A. Boe­t­ius (2019). An­aer­obic meth­ane ox­id­izers. In: T. Mc­Gen­ity (ed.), Mi­cro­bial com­munit­ies util­iz­ing hy­dro­car­bons and lip­ids: mem­bers, meta­ge­n­om­ics and eco­physiology, Hand­book of Hy­dro­car­bon and Lipid Mi­cro­bi­o­logy, Springer Nature Switzer­land, chapter 7, pp. 113-132. (doi.org/10.1007/978-3-030-14785-3_7).
Krüger K., M. Chafee, T. Ben Francis, T.G. del Rio, D. Becher, T. Schweder, R.I. Amann, H. Teeling. (2019). In ma­ri­ne Bacteroidetes the bulk of gly­can de­gra­da­ti­on du­ring al­gae blooms is me­dia­ted by few cla­des us­ing a re­stric­ted set of ge­nes. ISME J. 13:2800-16. (doi:10.1038/s41396-019-0476-y).
Laso-Pérez, R., C. Hahn, D.M. van Vliet, H.E. Te­get­meyer, F. Schubotz, N.T. Smit, T. Pape, H. Sah­ling, G. Bo­hr­mann, A. Boe­t­ius, K. Knittel, and G. We­gener (2019). An­aer­obic De­grad­a­tion of Non-Meth­ane Al­kanes by “Can­did­atus Meth­an­ol­i­paria” in Hy­dro­car­bon Seeps of the Gulf of Mex­ico. mbio 10: e01814-19. (10.1128/mBio.01814-19).
Meier, D.V., P. Pjevac, W. Bach, S. Mark­ert, T. Schweder, J. Jam­ieson, S. Petersen, R. Amann, and A. Meyerdierks. (2019). Mi­cro­bial metal-sulf­ide ox­id­a­tion in in­act­ive hy­dro­thermal vent chim­neys sug­ges­ted by meta­ge­n­omic and meta­pro­teo­mic ana­lyses. En­viron. Mi­cro­biol. [Epub ahead of print].(doi:10.1111/1462-2920.14514). 
Orellana, L.H., T.B. Francis, K. Krüger, H. Teeling, M.-C. Müller, B.M. Fuchs, K.T. Kon­stantin­idis, and R.I. Amann. (2019). Niche dif­fer­en­ti­ation among an­nu­ally re­cur­rent coastal Mar­ine Group II Euryar­chae­ota. ISME J. (doi.org/10.1038/s41396-019-0491-z).
Pjevac, P., S. Dyksma, T. Gold­ham­mer, I. Mu­jakic, M. Kob­lizek, M. Mussmann, R. Amann, S. Or­lic. (2019). In situ ab­un­dance and car­bon fixa­ti­on ac­tivi­ty of dis­tinct an­oxy­ge­nic pho­to­tro­phs in the stra­ti­fied sea­wa­ter lake Ro­goz­ni­ca. En­vi­ron. Mi­crio­bi­ol. 21:3896-908. (doi:10.1111/1462-2920.14739).
Puentes-Cala, E., and J. Harder. (2019). An RND trans­porter in the monoter­pene meta­bol­ism of Castellaniella defragrans. Bio­de­grad­a­tion. 30:1-12. (doi:10.1007/s10532-018-9857-6 ).
Ramirez, A.S., O.M. Vega-Orel­lana, T. Viver, J.B. Poveda, R.S. Ro­s­ales, C.G. Poveda, J. Spergser, M.P. Szos­tak, M.J. Caballero, L. Res­sel, J.M. Brad­bury, M.M. Ta­vio, S. Karthikeyan, R. Amann, K.T. Kon­stantin­idis, R. Ros­sello-Mora. (2019). First de­scrip­ti­on of two mo­dera­te­ly ha­lo­phi­lic and psy­chro­to­le­rant Mycoplasma spe­cies iso­la­ted from ce­pha­lo­pods and pro­po­sal of Mycoplasma marinum sp. nov. and Mycoplasma todarodis sp. nov. Syst. Appl. Mi­cro­bi­ol. 42:457-67. (doi:10.1016/j.syapm.2019.04.003).
Reintjes, G., C. Arnosti, B. Fuchs, R. Amann. (2019). Sel­fish, shar­ing and sca­ven­ging bac­te­ria in the At­lan­tic Oce­an: a bio­geo­gra­phi­cal stu­dy of bac­te­ri­al sub­stra­te uti­li­sa­ti­on. ISME J. 13:1119-32. (doi:10.1038/s41396-018-0326-3).
Reint­jes, G., H.E. Te­get­mey­er, M. Bür­gis­ser, S. Or­lić, I. Tews, M. Zub­kov, D. Voß, O. Zie­lin­ski, C. Quast, F.O. Glöck­ner, R. Amann, T.G. Fer­de­l­man, B.M. Fuchs. (2019). On site ana­lysis of bac­terial com­munit­ies of the ul­tra-oli­go­trophic South Pa­cific Gyre. Appl. En­vi­ron. Mi­cro­bi­ol. 85(14). (doi:10.1128/AEM.00184-19).
Ruff, S.E., J. Felden, H.R. Gruber-Vodicka, Y. Mar­con, K. Knittel, A. Ramette, and A. Boe­t­ius. (2019). In situ de­vel­op­ment of a meth­an­o­trophic mi­cro­bi­ome in deep-sea sed­i­ments. ISME J. 13:197-213. (doi:10.1038/s41396-018-0263-1).
Schada von Borzyskowski, L., F. Severi, K. Krüger, L. Her­mann, A. Gil­ar­det, F. Sip­pel, B. Pommer­enke, P. Claus, N.S. Cor­tina, T. Glat­ter, S. Za­u­ner, J. Za­r­zycki, B.M. Fuchs, E. Bremer, U.G. Maier, R.I. Amann, T.J. Erb. (2019). Ma­ri­ne Pro­te­ob­ac­te­ria me­ta­bo­li­ze gly­co­la­te via the beta-hy­droxyas­par­ta­te cy­cle. Na­tu­re. 575:500-4. (doi:10.1038/s41586-019-1748-4).
Viver, T., L.H. Orellana, S. Diaz, M. Ur­di­ain, M.D. Ramos-Barbero, J.E. Gonza­lez-Pas­tor, A. Oren, J.K. Hatt, R. Amann, J. Anton, K.T. Kon­stantin­idis, R. Ros­sello-Mora. (2019). Pre­do­mi­nan­ce of de­ter­mi­nis­tic mi­cro­bi­al com­mu­ni­ty dy­na­mics in sal­terns ex­po­sed to dif­fe­rent light in­ten­si­ties. En­vi­ron. Mi­crio­bi­ol. 21:4300-15. (doi:10.1111/1462-2920.14790).
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