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Pu­bli­ka­tio­nen 2016

Amann, R., and R. Ros­sel­lo-Mora (2016). Af­ter all, only mil­li­ons? mBio 7:e00999-16. (doi:10.1128/mBio.00999-16).
Bar­bey­ron, T., F. Tho­mas, V. Bar­be, H. Teeling, C. Sche­no­witz, C. Dos­sat, A. Goe­s­mann, C. Leblanc, F.O. Glöck­ner, M. Cz­jzek, R. Amann, and G. Mi­chel (2016). Ha­bi­tat und ta­xon as dri­ving forces of car­bo­hy­dra­te ca­t­a­bo­lism in ma­ri­ne he­te­ro­tro­phic bac­te­ria: ex­amp­le of the mo­del al­gae-as­so­cia­ted bac­te­ri­um Zobellia galactanivorans DsijT. En­vi­ron. Mi­cro­bi­ol. 18:4610-4627. (doi:10.1111/1462-2920.13584).
Bennke, C.M., G. Reintjes, M. Schattenhofer, A. Ellrott, J. Wulf, M. Zeder, and B.M. Fuchs (2016). Mo­di­fi­ca­ti­on of a high-through­put au­to­ma­tic mi­cro­bi­al cell en­u­me­ra­ti­on sys­tem for ship­board ana­ly­ses. En­vi­ron. Mi­cro­bi­ol. 82:3289-3296. (doi:10.1128/AEM.03931-15).
Bennke, C.M., K. Krüger, L. Kappelmann, S. Huang, A. Go­bet, M. Schü­ler, V. Bar­be, B.M. Fuchs, G. Mi­chel, H. Teeling, and R.I. Amann (2016). Po­ly­sac­cha­ri­de uti­liza­t­i­on loci of Bacteroidetes from two con­tras­ting open ocea sites in the North At­lan­tic. En­vi­ron. Mi­cro­bi­ol. 18:4456-4470. (doi:10.1111/1462-2920.13429).
Berg, J.S., D. Mi­chel­lod, P. Pjevac, C. Mar­ti­nez-Pe­rez, C.R.T. Buck­ner, P.F. Hach, C.J. Schu­bert, J. Mi­lucka, and M.M.M. Kuy­pers (2016). In­ten­se cryp­tic mi­cro­bi­al iron cy­cling in the low iron wa­ter co­lumn of the mero­mic­tic Lake Ca­da­g­no. En­vi­ron. Mi­cro­bi­ol. 18:5288-5302. (doi:10.1111/1462-2920.13587).
Bru­der, L.M., M. Dör­kes, B.M. Fuchs, W. Lud­wig, and W. Liebl (2016). Flow cy­to­metric sor­ting of fe­cal bac­te­ria af­ter in situ hy­bri­di­za­t­i­on with po­ly­nu­cleo­ti­de pro­bes. Syst. Appl. Mi­cro­bi­ol. 39:464-475. (doi:10.1016/j.syapm.2016.08.005).
Dyksma, S., K. Bischof, B.M. Fuchs, K. Hoff­mann, D. Meier, A. Meyerdierks, P. Pjevac, D. Probandt, M. Rich­ter, R. Ste­pa­n­aus­kas, and M. Mussmann (2016). Ubi­qui­tous Gammaproteobacteria do­mi­na­te dark car­bon fixa­ti­on in co­as­tal se­di­ments. ISME J. 10:1939-1953. (doi:10.1038/ismej.2015.257).
Flood, B.E., P. Fliss, D.S. Jo­nes, G.J. Dick, S. Jain, A.-K. Kas­ter, M. Win­kel, M. Mussmann, and J. Bai­ley (2016). Sin­gle-cell (meta-)ge­no­mics of a di­mor­phic Candidatus Thio­mar­ga­ri­ta nel­so­nii re­veals ge­no­mic plas­ti­ci­ty. Front. Mi­cro­bi­ol. 7:e603. (doi:10.3389/fmicb.2016.00603).
Kru­ken­berg, V., K. Har­ding, M. Rich­ter, F.O. Glöck­ner, H.R. Gru­ber-Vo­di­cka, B. Adam, J.S. Berg, K. Knittel, H.E. Te­get­mey­er, A. Boe­ti­us, and G. We­ge­ner (2016). Candidatus Des­ul­fo­fer­vi­dus au­xi­l­ii, a hy­dro­ge­notro­phic sul­fa­te-re­du­cing bac­te­ri­um in­vol­ved in the ther­mo­phi­lic an­ae­ro­bic oxi­da­ti­on of me­tha­ne. En­vi­ron. Mi­cro­bi­ol. 18:3073-3091. (doi:10.1111/1462-2920.13283).
Laso-Pe­rez, R., G. We­ge­ner, K. Knittel, F. Wid­del, K.J. Har­ding, V. Kru­ken­berg, D.V. Meier, M. Rich­ter, H.E. Te­get­mey­er, D. Rie­del, H.H. Rich­now, L. Adri­an, T. Reemts­ma, O.J. Lech­ten­feld, and F. Musat (2016). Ther­mo­phi­lic ar­chaea ac­tiva­te bu­tan via al­kyl-co­en­zy­me M for­ma­ti­on. Na­tu­re 539:396-401. (doi:10.1038/nature20152).
Mar­ti­nez-Pe­rez, C., W. Mohr, C.R. Lö­scher, J. De­ka­e­ze­ma­cker, S. Litt­mann, P. Yil­maz, N. Leh­nen, B.M. Fuchs, G. La­vik, R.A. Schmitz, J. La­Ro­che, and M.M.M. Kuy­pers (2016). The small unicel­lu­lar diaz­o­tro­phic sym­bi­ont, UCYN-A, is a key play­er in the ma­ri­ne ni­tro­gen cy­cle. Na­tu­re Mi­cro­bi­ol. 1:16163. (doi:10.1038/nmicrobiol.2016.163).
Meier, D., W. Bach, P.R. Gir­gu­is, H. Gru­ber-Vo­di­cka, E.P. Ree­ves, M. Rich­ter, C. Vi­dou­dez, R. Amann, and A. Meyerdierks (2016). He­te­ro­tro­phic Proteobacteria in the vicini­ty of dif­fu­se hydro­ther­mal ven­ting. En­vi­ron. Mi­cro­bi­ol. 18:4348-4368. (doi:10.1111/1462-2920.13304). 
Munoz, R., R. Ros­sel­lo-Mora, and R. Amann (2016). Re­vi­sed phy­lo­ge­ny of Bacteroidetes and pro­po­sal of six­teen new taxa and two new com­bi­na­ti­ons in­clu­ding Rhodothermaeota phyl. nov. Sys­tem. Appl. Mi­cro­bi­ol. 39:281-296. (doi:10.1016/j.syapm.2016.04.004).
Pan­schin, I., M. Be­cher, S. Ver­barg, C. Spö­er, M. Roh­de, M. Schü­ler, R.I. Amann, J. Har­der, B.J. Tindall, and R. Hahn­ke (2016). De­scrip­ti­on of Gramella forsetii sp.nov., a ma­ri­ne Flavobacteriaceae iso­la­ted from North Sea wa­ter, and emen­ded de­scrip­ti­on of Gramella gaetbulicola Cho et al. 2011. Int. J. Sys­tem. Evol. Mi­cro­bi­ol. D-16-00552R2. (doi:10.1099/ijsem.0.001700).
Piz­zet­ti, I., F. Schulz, T. Tyml, B.M. Fuchs, R. Amann, M. Horn, and S. Fazi (2016). Chla­my­di­al sea­so­nal dy­na­mics and iso­la­ti­on of ‘Candidatus Nep­tu­noch­la­my­dia ve­xil­li­fe­ra­e’ from a Tyr­rhe­ni­an co­as­tal lake. En­vi­ron. Mi­cro­bi­ol. 18:2405-2417. (doi:10.1111/1462-2920.13111). 
Piz­zet­ti, I., G. Lu­pi­ni, F.B. Au­bry, F. Acri, B.M. Fuchs, and S. Fazi (2016). In­flu­ence of Po Ri­ver ru­n­off on the bac­te­rio­plank­ton com­mu­ni­ty along tro­phic and sal­in­i­ty gra­di­ents in the Nort­hern Adrea­tic Sea. Mar. Ecol. 37:1386-1397. (doi:10.1111/maec.12355).
Rau­pach, M.J., R. Amann, Q.D. Whee­ler, and C. Roos (2016). The ap­p­li­ca­ti­on of “-omics” tech­no­lo­gies for the clas­si­fi­ca­ti­on and iden­ti­fi­ca­ti­on of ani­mals. Org. Di­vers. Evol. 16:1-12. (doi:10.1007/s13127-015-0234-6).
Ruff, S.E., H. Kuh­fuß, G. We­ge­ner, C. Lott, A. Ra­met­te, J. Wied­ling, K. Knittel, and M. We­ber (2016). Me­tha­ne seep in shal­low-wa­ter per­me­able se­di­ment har­bors high di­ver­si­ty of an­ae­ro­bic me­tha­notro­phic com­mu­nities, Elba, Ita­ly. Front. Mi­cro­bi­ol. 7:374. (doi:10.3389/fmicb.2016.00374).
Schi­mak, M.P., M. Klei­ner, S. Wet­zel, M. Lie­be­ke, N. Du­bi­lier, and B.M. Fuchs (2016). MiL-FISH: Mul­til­a­be­led oli­go­nu­cleo­ti­des for fluo­re­scence in situ hy­bri­di­za­t­i­on im­pro­ve vi­sua­liza­t­i­on of bac­te­ri­al cells. En­vi­ron. Mi­cro­bi­ol. 82:62-70. (doi:10.1128/AEM.02776-15).
Stagars, M., E. Ruff, R. Amann, and K. Knittel (2016). High di­ver­si­ty of an­ae­ro­bic al­ka­ne-de­gra­ding mi­cro­bi­al com­mu­nities in ma­ri­ne seep se­di­ments ba­sed on (1-me­thyl­al­kyl)suc­ci­na­te syn­tha­se ge­nes. Fron­tiers Mi­cro­bi­ol. 6:1511. (doi:10.3389/fmicb.2015.01511).
Teeling, H., B.M. Fuchs, C.M. Bennke, K. Krüger, M. Chafee, L. Kappelmann, G. Reintjes, J. Wald­mann, C. Quast, F.O. Glöck­ner, J. Lu­cas, A. Wi­chels, G. Gerdts, K.H. Wiltshire, and R.I. Amann (2016). Re­cur­ring pat­terns in bac­te­rio­plank­ton dy­na­mics du­ring co­as­tal spring al­gae blooms. eLi­fe 5:e11888. (doi:10.7554/eLife.11888).
We­ge­ner, G., V. Kru­ken­berg, S.E. Ruff, M.Y. Kel­ler­mann, and K. Knittel (2016). Me­ta­bo­lic ca­pa­bi­li­ties of mi­cro­or­ga­nisms in­vol­ved in and as­so­cia­ted with the an­ae­ro­bic oxi­da­ti­on of me­tha­ne. Front. Mi­cro­bi­ol. 7:e46. (doi:10.3389/fmicb.2016.00046). 
Winkel, M., V. Car­val­ho, T. Woy­ke, M. Rich­ter, H.N. Schulz-Vogt, B. Flood, J. Bai­ley, and M. Mussmann (2016). Sin­gle-cell se­quen­cing of Thiomargarita re­veals ge­no­mic fle­xi­bi­li­ty for ad­ap­ta­ti­on to dy­na­mic re­dox con­di­ti­ons. Front. Mi­cro­bi­ol. 7:e964. (doi:10.3389/fmicb.2016.00964).

 

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